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Mitochondrial Bioenergetics and Metabolism

Senior Research Fellow Eric Dufour

Publications

2024

  1. Tapanainen, R, Aasumets, K, Fekete, Z, Goffart, S, Dufour, E, L O Pohjoismäki, J et al.. Species-specific variation in mitochondrial genome tandem repeat polymorphisms in hares (Lepus spp., Lagomorpha, Leporidae) provides insight into their evolution. Gene. 2024;926 :148644. doi: 10.1016/j.gene.2024.148644. PubMed PMID:38851366 .
  2. Leclerc, S, Gupta, A, Ruokolainen, V, Chen, JH, Kunnas, K, Ekman, AA et al.. Progression of herpesvirus infection remodels mitochondrial organization and metabolism. PLoS Pathog. 2024;20 (4):e1011829. doi: 10.1371/journal.ppat.1011829. PubMed PMID:38620036 PubMed Central PMC11045090.
  3. Siempos, II, Kalil, AC, Belhadi, D, Veiga, VC, Cavalcanti, AB, Branch-Elliman, W et al.. Immunomodulators for immunocompromised patients hospitalized for COVID-19: a meta-analysis of randomized controlled trials. EClinicalMedicine. 2024;69 :102472. doi: 10.1016/j.eclinm.2024.102472. PubMed PMID:38361992 PubMed Central PMC10867612.

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2023

  1. Gaertner, K, Michell, C, Tapanainen, R, Goffart, S, Saari, S, Soininmäki, M et al.. Molecular phenotyping uncovers differences in basic housekeeping functions among closely related species of hares (Lepus spp., Lagomorpha: Leporidae). Mol Ecol. 2023;32 (15):4097-4117. doi: 10.1111/mec.16755. PubMed PMID:36320183 .

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2022

  1. Gaertner, K, Michell, C, Tapanainen, R, Goffart, S, Saari, S, Soininmäki, M et al.. Molecular phenotyping uncovers differences in basic housekeeping functions among closely related species of hares (Lepus spp., Lagomorpha: Leporidae). Mol Ecol. 2023;32 (15):4097-4117. doi: 10.1111/mec.16755. PubMed PMID:36320183 .
  2. L B Almeida, B, M Bahrudeen, MN, Chauhan, V, Dash, S, Kandavalli, V, Häkkinen, A et al.. The transcription factor network of E. coli steers global responses to shifts in RNAP concentration. Nucleic Acids Res. 2022;50 (12):6801-6819. doi: 10.1093/nar/gkac540. PubMed PMID:35748858 PubMed Central PMC9262627.
  3. Dufour, E, Jaziri, S, Novillo, MA, Aubert, L, Chambon, A, Kutz, R et al.. A randomized trial to determine the minimum effective lidocaine volume for median nerve block using hydrodissection. Sci Rep. 2022;12 (1):52. doi: 10.1038/s41598-021-03660-7. PubMed PMID:34996918 PubMed Central PMC8742045.
  4. Delaugerre, C, Foissac, F, Abdoul, H, Masson, G, Choupeaux, L, Dufour, E et al.. Prevention of SARS-CoV-2 transmission during a large, live, indoor gathering (SPRING): a non-inferiority, randomised, controlled trial. Lancet Infect Dis. 2022;22 (3):341-348. doi: 10.1016/S1473-3099(21)00673-3. PubMed PMID:34843662 PubMed Central PMC8626094.

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2021

  1. Delaugerre, C, Foissac, F, Abdoul, H, Masson, G, Choupeaux, L, Dufour, E et al.. Prevention of SARS-CoV-2 transmission during a large, live, indoor gathering (SPRING): a non-inferiority, randomised, controlled trial. Lancet Infect Dis. 2022;22 (3):341-348. doi: 10.1016/S1473-3099(21)00673-3. PubMed PMID:34843662 PubMed Central PMC8626094.

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2020

  1. Yalgin, C, Rovenko, B, Andjelković, A, Neefjes, M, Oymak, B, Dufour, E et al.. Effects on Dopaminergic Neurons Are Secondary in COX-Deficient Locomotor Dysfunction in Drosophila. iScience. 2020;23 (8):101362. doi: 10.1016/j.isci.2020.101362. PubMed PMID:32738610 PubMed Central PMC7394922.
  2. González de Cózar, JM, Carretero-Junquera, M, Ciesielski, GL, Miettinen, SM, Varjosalo, M, Kaguni, LS et al.. A second hybrid-binding domain modulates the activity of Drosophila ribonuclease H1. J Biochem. 2020;168 (5):515-533. doi: 10.1093/jb/mvaa067. PubMed PMID:32589740 PubMed Central PMC7657459.
  3. Sommer, N, Alebrahimdehkordi, N, Pak, O, Knoepp, F, Strielkov, I, Scheibe, S et al.. Bypassing mitochondrial complex III using alternative oxidase inhibits acute pulmonary oxygen sensing. Sci Adv. 2020;6 (16):eaba0694. doi: 10.1126/sciadv.aba0694. PubMed PMID:32426457 PubMed Central PMC7159913.
  4. Szibor, M, Schreckenberg, R, Gizatullina, Z, Dufour, E, Wiesnet, M, Dhandapani, PK et al.. Respiratory chain signalling is essential for adaptive remodelling following cardiac ischaemia. J Cell Mol Med. 2020;24 (6):3534-3548. doi: 10.1111/jcmm.15043. PubMed PMID:32040259 PubMed Central PMC7131948.
  5. Szibor, M, Gainutdinov, T, Fernandez-Vizarra, E, Dufour, E, Gizatullina, Z, Debska-Vielhaber, G et al.. Bioenergetic consequences from xenotopic expression of a tunicate AOX in mouse mitochondria: Switch from RET and ROS to FET. Biochim Biophys Acta Bioenerg. 2020;1861 (2):148137. doi: 10.1016/j.bbabio.2019.148137. PubMed PMID:31825809 .

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2019

  1. Szibor, M, Gainutdinov, T, Fernandez-Vizarra, E, Dufour, E, Gizatullina, Z, Debska-Vielhaber, G et al.. Bioenergetic consequences from xenotopic expression of a tunicate AOX in mouse mitochondria: Switch from RET and ROS to FET. Biochim Biophys Acta Bioenerg. 2020;1861 (2):148137. doi: 10.1016/j.bbabio.2019.148137. PubMed PMID:31825809 .
  2. Bahhir, D, Yalgin, C, Ots, L, Järvinen, S, George, J, Naudí, A et al.. Manipulating mtDNA in vivo reprograms metabolism via novel response mechanisms. PLoS Genet. 2019;15 (10):e1008410. doi: 10.1371/journal.pgen.1008410. PubMed PMID:31584940 PubMed Central PMC6795474.
  3. Lietzén, N, Hirvonen, K, Honkimaa, A, Buchacher, T, Laiho, JE, Oikarinen, S et al.. Coxsackievirus B Persistence Modifies the Proteome and the Secretome of Pancreatic Ductal Cells. iScience. 2019;19 :340-357. doi: 10.1016/j.isci.2019.07.040. PubMed PMID:31404834 PubMed Central PMC6699423.
  4. Dhandapani, PK, Lyyski, AM, Paulin, L, Khan, NA, Suomalainen, A, Auvinen, P et al.. Phenotypic effects of dietary stress in combination with a respiratory chain bypass in mice. Physiol Rep. 2019;7 (13):e14159. doi: 10.14814/phy2.14159. PubMed PMID:31267687 PubMed Central PMC6606514.
  5. Saari, S, Kemppainen, E, Tuomela, T, Oliveira, MT, Dufour, E, Jacobs, HT et al.. Alternative oxidase confers nutritional limitation on Drosophila development. J Exp Zool A Ecol Integr Physiol. 2019;331 (6):341-356. doi: 10.1002/jez.2274. PubMed PMID:31218852 PubMed Central PMC6617715.
  6. González de Cózar, JM, Gerards, M, Teeri, E, George, J, Dufour, E, Jacobs, HT et al.. RNase H1 promotes replication fork progression through oppositely transcribed regions of Drosophila mitochondrial DNA. J Biol Chem. 2019;294 (12):4331-4344. doi: 10.1074/jbc.RA118.007015. PubMed PMID:30635398 PubMed Central PMC6433063.
  7. Saari, S, Garcia, GS, Bremer, K, Chioda, MM, Andjelković, A, Debes, PV et al.. Alternative respiratory chain enzymes: Therapeutic potential and possible pitfalls. Biochim Biophys Acta Mol Basis Dis. 2019;1865 (4):854-866. doi: 10.1016/j.bbadis.2018.10.012. PubMed PMID:30342157 .

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2018

  1. Saari, S, Garcia, GS, Bremer, K, Chioda, MM, Andjelković, A, Debes, PV et al.. Alternative respiratory chain enzymes: Therapeutic potential and possible pitfalls. Biochim Biophys Acta Mol Basis Dis. 2019;1865 (4):854-866. doi: 10.1016/j.bbadis.2018.10.012. PubMed PMID:30342157 .
  2. Andjelković, A, Mordas, A, Bruinsma, L, Ketola, A, Cannino, G, Giordano, L et al.. Expression of the Alternative Oxidase Influences Jun N-Terminal Kinase Signaling and Cell Migration. Mol Cell Biol. 2018;38 (24):. doi: 10.1128/MCB.00110-18. PubMed PMID:30224521 PubMed Central PMC6275184.
  3. Toompuu, M, Tuomela, T, Laine, P, Paulin, L, Dufour, E, Jacobs, HT et al.. Polyadenylation and degradation of structurally abnormal mitochondrial tRNAs in human cells. Nucleic Acids Res. 2018;46 (10):5209-5226. doi: 10.1093/nar/gky159. PubMed PMID:29518244 PubMed Central PMC6007314.
  4. Luukinen, H, Hammarén, MM, Vanha-Aho, LM, Svorjova, A, Kantanen, L, Järvinen, S et al.. Priming of innate antimycobacterial immunity by heat-killed Listeria monocytogenes induces sterilizing response in the adult zebrafish tuberculosis model. Dis Model Mech. 2018;11 (1):. doi: 10.1242/dmm.031658. PubMed PMID:29208761 PubMed Central PMC5818079.

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